Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh9F8VPK8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh9F8VPK8 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh9F8VPK8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh9F8VPK8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh9F8VPK8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh9F8VPK8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdh9F8VPK8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh9F8VPK8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Gm18195-201ENSMUST00000207604 706 ntBASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh9F8VPK8 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Gm4899-201ENSMUST00000178708 719 ntBASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh9F8VPK8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.02
Pcdh9F8VPK8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.02
Pcdh9F8VPK8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh9F8VPK8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.13■□□□□ 0.01
Pcdh9F8VPK8 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms