Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc188F6WEU2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc188F6WEU2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 BC001981-202ENSMUST00000191393 1545 ntBASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Mir7032-201ENSMUST00000185154 79 ntBASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Gm29787-201ENSMUST00000222129 849 ntBASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Gm5161-201ENSMUST00000075243 853 ntBASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc188F6WEU2 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.77□□□□□ -0.04
Ccdc188F6WEU2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc188F6WEU2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ccdc188F6WEU2 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.77□□□□□ -0.04
Ccdc188F6WEU2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc188F6WEU2 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.77□□□□□ -0.04
Ccdc188F6WEU2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc188F6WEU2 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Ccdc188F6WEU2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc188F6WEU2 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.77□□□□□ -0.05
Ccdc188F6WEU2 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc188F6WEU2 Gm22331-201ENSMUST00000158066 136 ntBASIC14.77□□□□□ -0.05
Ccdc188F6WEU2 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.77□□□□□ -0.05
Ccdc188F6WEU2 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.77□□□□□ -0.05
Ccdc188F6WEU2 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.77□□□□□ -0.05
Ccdc188F6WEU2 Gm45865-201ENSMUST00000211815 945 ntBASIC14.77□□□□□ -0.05
Ccdc188F6WEU2 Gm5363-201ENSMUST00000211927 938 ntBASIC14.77□□□□□ -0.05
Ccdc188F6WEU2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ccdc188F6WEU2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc188F6WEU2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.77□□□□□ -0.05
Ccdc188F6WEU2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc188F6WEU2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc188F6WEU2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms