Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Gm38294-201ENSMUST00000192831 381 ntBASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Srp54bE9PXC0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Srp54bE9PXC0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Gm13453-201ENSMUST00000118708 357 ntBASIC14.54□□□□□ -0.08
Srp54bE9PXC0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Gm25144-201ENSMUST00000179561 110 ntBASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Gm25352-201ENSMUST00000179815 110 ntBASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Gm27306-201ENSMUST00000183970 107 ntBASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Gm18766-201ENSMUST00000189811 808 ntBASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Gm6888-201ENSMUST00000221983 706 ntBASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Srp54bE9PXC0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms