Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm5479-201ENSMUST00000160578 435 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm29310-201ENSMUST00000185468 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm21825-201ENSMUST00000185728 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm29109-201ENSMUST00000185895 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm21896-201ENSMUST00000186520 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm21873-201ENSMUST00000186728 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm21794-201ENSMUST00000187056 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm21880-201ENSMUST00000187275 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm21826-201ENSMUST00000187451 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm21198-201ENSMUST00000188393 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm21749-201ENSMUST00000189343 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm21901-201ENSMUST00000189568 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm29424-201ENSMUST00000189716 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm28599-201ENSMUST00000189838 694 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm21867-201ENSMUST00000189917 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm29269-201ENSMUST00000190087 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm21722-201ENSMUST00000190153 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm28423-201ENSMUST00000190701 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm21899-201ENSMUST00000190745 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm21910-201ENSMUST00000191163 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm21849-201ENSMUST00000191571 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm28678-201ENSMUST00000191593 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm20910-201ENSMUST00000193268 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm21871-201ENSMUST00000194621 696 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 Gm6266-201ENSMUST00000203844 806 ntBASIC13.24□□□□□ -0.29
Shank1D3YZU1 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shank1D3YZU1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.23□□□□□ -0.29
Shank1D3YZU1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Shank1D3YZU1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.23□□□□□ -0.29
Shank1D3YZU1 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.23□□□□□ -0.29
Shank1D3YZU1 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.23□□□□□ -0.29
Shank1D3YZU1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shank1D3YZU1 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Gm8602-201ENSMUST00000184045 607 ntBASIC13.22□□□□□ -0.29
Shank1D3YZU1 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Gm18624-201ENSMUST00000220966 658 ntBASIC13.22□□□□□ -0.29
Shank1D3YZU1 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.22□□□□□ -0.29
Shank1D3YZU1 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms