Protein–RNA interactions for Protein: B2RXZ1

Pnldc1, Poly(A)-specific ribonuclease PNLDC1, mousemouse

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pnldc1B2RXZ1 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Gm43767-201ENSMUST00000198933 381 ntBASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pnldc1B2RXZ1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pnldc1B2RXZ1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pnldc1B2RXZ1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pnldc1B2RXZ1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pnldc1B2RXZ1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pnldc1B2RXZ1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pnldc1B2RXZ1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pnldc1B2RXZ1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms