Protein–RNA interactions for Protein: B1AUC4

Ube2u, Ubiquitin-conjugating enzyme E2U (putative), mousemouse

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2uB1AUC4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ube2uB1AUC4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Ube2uB1AUC4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC22.08■■□□□ 1.13
Ube2uB1AUC4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC22.08■■□□□ 1.13
Ube2uB1AUC4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ube2uB1AUC4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Ube2uB1AUC4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ube2uB1AUC4 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC22.08■■□□□ 1.13
Ube2uB1AUC4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ube2uB1AUC4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ube2uB1AUC4 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Ube2uB1AUC4 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Ube2uB1AUC4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC22.08■■□□□ 1.13
Ube2uB1AUC4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC22.08■■□□□ 1.13
Ube2uB1AUC4 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC22.08■■□□□ 1.13
Ube2uB1AUC4 Gm18057-201ENSMUST00000208220 503 ntBASIC22.08■■□□□ 1.13
Ube2uB1AUC4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Ube2uB1AUC4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Ube2uB1AUC4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ube2uB1AUC4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ube2uB1AUC4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
Ube2uB1AUC4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC22.08■■□□□ 1.12
Ube2uB1AUC4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
Ube2uB1AUC4 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ube2uB1AUC4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Ube2uB1AUC4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ube2uB1AUC4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Gm15968-201ENSMUST00000119342 1168 ntBASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Gm43352-201ENSMUST00000196419 3065 ntBASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ube2uB1AUC4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ube2uB1AUC4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ube2uB1AUC4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ube2uB1AUC4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Ube2uB1AUC4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ube2uB1AUC4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ube2uB1AUC4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Ube2uB1AUC4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Ube2uB1AUC4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
Ube2uB1AUC4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Ube2uB1AUC4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ube2uB1AUC4 Gm16026-204ENSMUST00000162652 683 ntBASIC22.06■■□□□ 1.12
Ube2uB1AUC4 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC22.06■■□□□ 1.12
Ube2uB1AUC4 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC22.06■■□□□ 1.12
Ube2uB1AUC4 Gm28923-201ENSMUST00000187755 322 ntBASIC22.06■■□□□ 1.12
Ube2uB1AUC4 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ube2uB1AUC4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC22.06■■□□□ 1.12
Ube2uB1AUC4 CT030684.1-201ENSMUST00000227292 914 ntBASIC22.06■■□□□ 1.12
Ube2uB1AUC4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ube2uB1AUC4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ube2uB1AUC4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ube2uB1AUC4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ube2uB1AUC4 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ube2uB1AUC4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ube2uB1AUC4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ube2uB1AUC4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ube2uB1AUC4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ube2uB1AUC4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC22.05■■□□□ 1.12
Ube2uB1AUC4 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ube2uB1AUC4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Ube2uB1AUC4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC22.05■■□□□ 1.12
Ube2uB1AUC4 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ube2uB1AUC4 Gm44044-201ENSMUST00000205178 1089 ntBASIC22.05■■□□□ 1.12
Ube2uB1AUC4 AC164567.1-201ENSMUST00000219185 960 ntBASIC22.05■■□□□ 1.12
Ube2uB1AUC4 AC131187.1-201ENSMUST00000224567 809 ntBASIC22.05■■□□□ 1.12
Ube2uB1AUC4 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Ube2uB1AUC4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ube2uB1AUC4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC22.05■■□□□ 1.12
Ube2uB1AUC4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC22.05■■□□□ 1.12
Ube2uB1AUC4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ube2uB1AUC4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ube2uB1AUC4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Ube2uB1AUC4 Gm27528-202ENSMUST00000222916 2012 ntBASIC22.04■■□□□ 1.12
Ube2uB1AUC4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ube2uB1AUC4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ube2uB1AUC4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ube2uB1AUC4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ube2uB1AUC4 Celf4-206ENSMUST00000224553 1729 ntBASIC22.04■■□□□ 1.12
Ube2uB1AUC4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ube2uB1AUC4 Gm15593-201ENSMUST00000122085 1008 ntBASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms