Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm3222-201ENSMUST00000071282 990 ntBASIC11.05□□□□□ -0.64
Col6a5A6H584 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Col6a5A6H584 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Col6a5A6H584 Gm10461-201ENSMUST00000202073 4786 ntBASIC11.05□□□□□ -0.64
Col6a5A6H584 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Col6a5A6H584 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.05□□□□□ -0.64
Col6a5A6H584 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.05□□□□□ -0.64
Col6a5A6H584 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.05□□□□□ -0.64
Col6a5A6H584 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
Col6a5A6H584 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.05□□□□□ -0.64
Col6a5A6H584 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.05□□□□□ -0.64
Col6a5A6H584 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.05□□□□□ -0.64
Col6a5A6H584 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.04□□□□□ -0.64
Col6a5A6H584 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC11.04□□□□□ -0.64
Col6a5A6H584 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a5A6H584 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Col6a5A6H584 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Col6a5A6H584 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC11.04□□□□□ -0.64
Col6a5A6H584 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a5A6H584 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a5A6H584 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Col6a5A6H584 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a5A6H584 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.04□□□□□ -0.64
Col6a5A6H584 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a5A6H584 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a5A6H584 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.04□□□□□ -0.64
Col6a5A6H584 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a5A6H584 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.04□□□□□ -0.64
Col6a5A6H584 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.04□□□□□ -0.64
Col6a5A6H584 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.04□□□□□ -0.64
Col6a5A6H584 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.04□□□□□ -0.64
Col6a5A6H584 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a5A6H584 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Col6a5A6H584 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a5A6H584 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a5A6H584 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a5A6H584 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a5A6H584 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a5A6H584 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.04□□□□□ -0.64
Col6a5A6H584 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a5A6H584 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.04□□□□□ -0.64
Col6a5A6H584 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a5A6H584 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a5A6H584 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a5A6H584 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a5A6H584 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Col6a5A6H584 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.04□□□□□ -0.64
Col6a5A6H584 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a5A6H584 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col6a5A6H584 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Col6a5A6H584 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Col6a5A6H584 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Col6a5A6H584 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.03□□□□□ -0.64
Col6a5A6H584 Gm6983-201ENSMUST00000214912 628 ntBASIC11.03□□□□□ -0.64
Col6a5A6H584 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a5A6H584 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms