Protein–RNA interactions for Protein: A2A259

Pkd2l1, Polycystic kidney disease 2-like 1 protein, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd2l1A2A259 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.5□□□□□ -0.09
Pkd2l1A2A259 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pkd2l1A2A259 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Pkd2l1A2A259 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.5□□□□□ -0.09
Pkd2l1A2A259 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pkd2l1A2A259 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pkd2l1A2A259 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pkd2l1A2A259 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pkd2l1A2A259 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Gm7787-201ENSMUST00000216858 688 ntBASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pkd2l1A2A259 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Gm17271-201ENSMUST00000165535 355 ntBASIC14.48□□□□□ -0.09
Pkd2l1A2A259 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Chchd1-203ENSMUST00000224633 557 ntBASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
Pkd2l1A2A259 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Gm19164-201ENSMUST00000210667 640 ntBASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd2l1A2A259 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms