Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm12620-201ENSMUST00000119791 1986 ntBASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm12612-201ENSMUST00000140182 1986 ntBASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm7935-201ENSMUST00000100555 1278 ntBASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm8318-201ENSMUST00000182954 872 ntBASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm45760-201ENSMUST00000212190 1782 ntBASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm7284-201ENSMUST00000131667 944 ntBASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Celf4-206ENSMUST00000224553 1729 ntBASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 AC124569.2-201ENSMUST00000225998 818 ntBASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms