Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Mir5126-201ENSMUST00000175513 77 ntBASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gm27628-201ENSMUST00000184911 107 ntBASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gm2651-201ENSMUST00000203560 838 ntBASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gm9449-201ENSMUST00000207265 1011 ntBASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gm42670-201ENSMUST00000201816 1292 ntBASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 CT010506.4-201ENSMUST00000225457 351 ntBASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms