Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm18959-201ENSMUST00000208954 655 ntBASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Matn2-206ENSMUST00000228570 2798 ntBASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trbv3A0A0A6YYE2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.4□□□□□ -0.59
Trbv3A0A0A6YYE2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.4□□□□□ -0.59
Trbv3A0A0A6YYE2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Trbv3A0A0A6YYE2 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trbv3A0A0A6YYE2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trbv3A0A0A6YYE2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trbv3A0A0A6YYE2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trbv3A0A0A6YYE2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trbv3A0A0A6YYE2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trbv3A0A0A6YYE2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Gm8520-201ENSMUST00000186517 868 ntBASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Gm18622-201ENSMUST00000219361 595 ntBASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.39□□□□□ -0.59
Trbv3A0A0A6YYE2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Trbv3A0A0A6YYE2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms