Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6-5A0A075B6B5 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6-5A0A075B6B5 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6-5A0A075B6B5 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trav6-5A0A075B6B5 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6-5A0A075B6B5 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6-5A0A075B6B5 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Trav6-5A0A075B6B5 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6-5A0A075B6B5 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6-5A0A075B6B5 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trav6-5A0A075B6B5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6-5A0A075B6B5 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Gm13312-201ENSMUST00000119631 718 ntBASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Gm13436-201ENSMUST00000120418 567 ntBASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Arhgef33-211ENSMUST00000225658 473 ntBASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-5A0A075B6B5 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms