Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Trav6-4A0A075B6B4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav6-4A0A075B6B4 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav6-4A0A075B6B4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.4□□□□□ -0.59
Trav6-4A0A075B6B4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.4□□□□□ -0.59
Trav6-4A0A075B6B4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav6-4A0A075B6B4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.59
Trav6-4A0A075B6B4 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav6-4A0A075B6B4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Gm11779-201ENSMUST00000118541 368 ntBASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Gm5264-201ENSMUST00000190584 848 ntBASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-4A0A075B6B4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Gm27525-201ENSMUST00000184465 107 ntBASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Gm44492-201ENSMUST00000197012 141 ntBASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-4A0A075B6B4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms