Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Olfr129-201ENSMUST00000122318 993 ntBASIC11.77□□□□□ -0.53
Trav17A0A075B655 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Gm10499-201ENSMUST00000174094 934 ntBASIC11.77□□□□□ -0.53
Trav17A0A075B655 Gm27867-201ENSMUST00000184778 125 ntBASIC11.77□□□□□ -0.53
Trav17A0A075B655 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.77□□□□□ -0.53
Trav17A0A075B655 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav17A0A075B655 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Gm27742-201ENSMUST00000184667 60 ntBASIC11.76□□□□□ -0.53
Trav17A0A075B655 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav17A0A075B655 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav17A0A075B655 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Trav17A0A075B655 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav17A0A075B655 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.75□□□□□ -0.53
Trav17A0A075B655 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav17A0A075B655 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav17A0A075B655 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms