Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.58□□□□□ -0.39
Trav15d-1-dv6d-1A0A075B624 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms