Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.13□□□□□ -0.31
Trav10nA0A075B622 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav10nA0A075B622 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Carlr-201ENSMUST00000181515 2574 ntBASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.12□□□□□ -0.31
Trav10nA0A075B622 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav10nA0A075B622 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Gm44771-201ENSMUST00000206975 626 ntBASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Gm18206-201ENSMUST00000207027 926 ntBASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav10nA0A075B622 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms