Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav5-1A0A075B5Z7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav5-1A0A075B5Z7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Mir449b-201ENSMUST00000104833 80 ntBASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm27430-201ENSMUST00000184585 107 ntBASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm44333-201ENSMUST00000197168 107 ntBASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm44872-201ENSMUST00000207864 420 ntBASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-1A0A075B5Z7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm8749-201ENSMUST00000117737 331 ntBASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm5479-201ENSMUST00000160578 435 ntBASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm45098-201ENSMUST00000207179 657 ntBASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm18049-201ENSMUST00000208909 581 ntBASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Trav5-1A0A075B5Z7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm13616-201ENSMUST00000120600 222 ntBASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-1A0A075B5Z7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms