Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbv4A0A075B5I2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Gm27301-201ENSMUST00000184012 127 ntBASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Gm17968-201ENSMUST00000194902 784 ntBASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv4A0A075B5I2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Gm2451-201ENSMUST00000199447 999 ntBASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Gm10290-201ENSMUST00000200451 999 ntBASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Gm45747-201ENSMUST00000212203 999 ntBASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv4A0A075B5I2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv4A0A075B5I2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv4A0A075B5I2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trbv4A0A075B5I2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv4A0A075B5I2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms