Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Gm28033-201ENSMUST00000184224 96 ntBASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Gm6089-201ENSMUST00000197666 938 ntBASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Gm43767-201ENSMUST00000198933 381 ntBASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Gm7787-201ENSMUST00000216858 688 ntBASIC13.34□□□□□ -0.27
H2afb3S4R1G7 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb3S4R1G7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
H2afb3S4R1G7 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
H2afb3S4R1G7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
H2afb3S4R1G7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
H2afb3S4R1G7 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
H2afb3S4R1G7 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Gm7222-201ENSMUST00000117512 906 ntBASIC13.33□□□□□ -0.28
H2afb3S4R1G7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Gm21362-201ENSMUST00000194272 928 ntBASIC13.33□□□□□ -0.28
H2afb3S4R1G7 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb3S4R1G7 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.32□□□□□ -0.28
H2afb3S4R1G7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb3S4R1G7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb3S4R1G7 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb3S4R1G7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
H2afb3S4R1G7 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb3S4R1G7 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.32□□□□□ -0.28
H2afb3S4R1G7 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
H2afb3S4R1G7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb3S4R1G7 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb3S4R1G7 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.32□□□□□ -0.28
H2afb3S4R1G7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.32□□□□□ -0.28
H2afb3S4R1G7 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.32□□□□□ -0.28
H2afb3S4R1G7 Gm25990-201ENSMUST00000102440 86 ntBASIC13.32□□□□□ -0.28
H2afb3S4R1G7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb3S4R1G7 Gm12134-201ENSMUST00000122109 520 ntBASIC13.32□□□□□ -0.28
H2afb3S4R1G7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.32□□□□□ -0.28
H2afb3S4R1G7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms