Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldn9Q9Z0S7 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.25□□□□□ -0.13
Cldn9Q9Z0S7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Gm18733-201ENSMUST00000173950 856 ntBASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Gm2272-201ENSMUST00000194903 582 ntBASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Mzt1-203ENSMUST00000227948 952 ntBASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Cldn9Q9Z0S7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cldn9Q9Z0S7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cldn9Q9Z0S7 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn9Q9Z0S7 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn9Q9Z0S7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn9Q9Z0S7 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn9Q9Z0S7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cldn9Q9Z0S7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn9Q9Z0S7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn9Q9Z0S7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.23□□□□□ -0.13
Cldn9Q9Z0S7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.23□□□□□ -0.13
Cldn9Q9Z0S7 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn9Q9Z0S7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn9Q9Z0S7 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.23□□□□□ -0.13
Cldn9Q9Z0S7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn9Q9Z0S7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn9Q9Z0S7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Cldn9Q9Z0S7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms