Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Gm37213-201ENSMUST00000193077 586 ntBASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Gm28659-201ENSMUST00000188013 759 ntBASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Rps4l-201ENSMUST00000071745 943 ntBASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.29■□□□□ 0.04
Msh5Q9QUM7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.29■□□□□ 0.04
Msh5Q9QUM7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Gm38262-201ENSMUST00000194760 1382 ntBASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Mir8098-201ENSMUST00000184011 137 ntBASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Gm27741-201ENSMUST00000185060 237 ntBASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Gm37293-201ENSMUST00000191658 295 ntBASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Msh5Q9QUM7 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.27■□□□□ 0.04
Msh5Q9QUM7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Msh5Q9QUM7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Msh5Q9QUM7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Msh5Q9QUM7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Msh5Q9QUM7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Msh5Q9QUM7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Msh5Q9QUM7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Msh5Q9QUM7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Msh5Q9QUM7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Msh5Q9QUM7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Msh5Q9QUM7 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
Msh5Q9QUM7 Gm28923-201ENSMUST00000187755 322 ntBASIC15.27■□□□□ 0.04
Msh5Q9QUM7 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.27■□□□□ 0.04
Msh5Q9QUM7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Msh5Q9QUM7 Gm42516-201ENSMUST00000198691 767 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms