Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Gm9987-201ENSMUST00000069768 567 ntBASIC14.28□□□□□ -0.12
Ube4bQ9ES00 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4bQ9ES00 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ube4bQ9ES00 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.27□□□□□ -0.12
Ube4bQ9ES00 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ube4bQ9ES00 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ube4bQ9ES00 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ube4bQ9ES00 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ube4bQ9ES00 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.27□□□□□ -0.12
Ube4bQ9ES00 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ube4bQ9ES00 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Ube4bQ9ES00 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ube4bQ9ES00 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ube4bQ9ES00 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ube4bQ9ES00 Gm10013-201ENSMUST00000106074 672 ntBASIC14.27□□□□□ -0.13
Ube4bQ9ES00 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4bQ9ES00 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4bQ9ES00 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4bQ9ES00 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4bQ9ES00 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4bQ9ES00 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Ube4bQ9ES00 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4bQ9ES00 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4bQ9ES00 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4bQ9ES00 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ube4bQ9ES00 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4bQ9ES00 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4bQ9ES00 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4bQ9ES00 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4bQ9ES00 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.27□□□□□ -0.13
Ube4bQ9ES00 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4bQ9ES00 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4bQ9ES00 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4bQ9ES00 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Gm6257-201ENSMUST00000163864 910 ntBASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4bQ9ES00 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4bQ9ES00 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms