Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf1Q9EPU4 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf1Q9EPU4 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cpsf1Q9EPU4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf1Q9EPU4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf1Q9EPU4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf1Q9EPU4 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf1Q9EPU4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC20.27■□□□□ 0.84
Cpsf1Q9EPU4 Gm37728-201ENSMUST00000195025 2292 ntBASIC20.27■□□□□ 0.84
Cpsf1Q9EPU4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
Cpsf1Q9EPU4 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC20.27■□□□□ 0.84
Cpsf1Q9EPU4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cpsf1Q9EPU4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cpsf1Q9EPU4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cpsf1Q9EPU4 Gm15321-201ENSMUST00000121290 288 ntBASIC20.27■□□□□ 0.83
Cpsf1Q9EPU4 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC20.27■□□□□ 0.83
Cpsf1Q9EPU4 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cpsf1Q9EPU4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
Cpsf1Q9EPU4 Gm24694-201ENSMUST00000180054 110 ntBASIC20.27■□□□□ 0.83
Cpsf1Q9EPU4 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cpsf1Q9EPU4 Gm27663-201ENSMUST00000184839 110 ntBASIC20.27■□□□□ 0.83
Cpsf1Q9EPU4 AC121598.1-201ENSMUST00000228224 1019 ntBASIC20.27■□□□□ 0.83
Cpsf1Q9EPU4 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC20.27■□□□□ 0.83
Cpsf1Q9EPU4 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Cpsf1Q9EPU4 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC20.27■□□□□ 0.83
Cpsf1Q9EPU4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cpsf1Q9EPU4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 AC155729.1-201ENSMUST00000227758 544 ntBASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cpsf1Q9EPU4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC20.25■□□□□ 0.83
Cpsf1Q9EPU4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cpsf1Q9EPU4 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf1Q9EPU4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.25■□□□□ 0.83
Cpsf1Q9EPU4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC20.25■□□□□ 0.83
Cpsf1Q9EPU4 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cpsf1Q9EPU4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf1Q9EPU4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC20.25■□□□□ 0.83
Cpsf1Q9EPU4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC20.25■□□□□ 0.83
Cpsf1Q9EPU4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf1Q9EPU4 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf1Q9EPU4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC20.25■□□□□ 0.83
Cpsf1Q9EPU4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC20.25■□□□□ 0.83
Cpsf1Q9EPU4 Gm12882-201ENSMUST00000121696 517 ntBASIC20.25■□□□□ 0.83
Cpsf1Q9EPU4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Cpsf1Q9EPU4 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cpsf1Q9EPU4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cpsf1Q9EPU4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Gm7820-201ENSMUST00000121012 1052 ntBASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf1Q9EPU4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC20.23■□□□□ 0.83
Cpsf1Q9EPU4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf1Q9EPU4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf1Q9EPU4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf1Q9EPU4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf1Q9EPU4 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf1Q9EPU4 Mir1897-201ENSMUST00000122581 272 ntBASIC20.23■□□□□ 0.83
Cpsf1Q9EPU4 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC20.23■□□□□ 0.83
Cpsf1Q9EPU4 Gm27838-201ENSMUST00000184829 128 ntBASIC20.23■□□□□ 0.83
Cpsf1Q9EPU4 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC20.23■□□□□ 0.83
Cpsf1Q9EPU4 Gm5186-201ENSMUST00000218781 920 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms