Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdc40Q9DC48 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdc40Q9DC48 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdc40Q9DC48 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Cdc40Q9DC48 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Cdc40Q9DC48 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdc40Q9DC48 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdc40Q9DC48 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdc40Q9DC48 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cdc40Q9DC48 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cdc40Q9DC48 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cdc40Q9DC48 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdc40Q9DC48 Gm10499-201ENSMUST00000174094 934 ntBASIC13.77□□□□□ -0.21
Cdc40Q9DC48 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdc40Q9DC48 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.77□□□□□ -0.21
Cdc40Q9DC48 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.77□□□□□ -0.21
Cdc40Q9DC48 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdc40Q9DC48 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.77□□□□□ -0.21
Cdc40Q9DC48 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.77□□□□□ -0.21
Cdc40Q9DC48 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdc40Q9DC48 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdc40Q9DC48 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdc40Q9DC48 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdc40Q9DC48 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdc40Q9DC48 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdc40Q9DC48 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdc40Q9DC48 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Gm10576-201ENSMUST00000191927 825 ntBASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Gm17968-201ENSMUST00000194902 784 ntBASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Gm18246-201ENSMUST00000221023 728 ntBASIC13.76□□□□□ -0.21
Cdc40Q9DC48 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.76□□□□□ -0.21
Cdc40Q9DC48 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdc40Q9DC48 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdc40Q9DC48 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cdc40Q9DC48 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms