Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Gm38391-201ENSMUST00000191720 4069 ntBASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Chmp5Q9D7S9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.55■□□□□ 0.56
Chmp5Q9D7S9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Gm44981-201ENSMUST00000205549 1943 ntBASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.54■□□□□ 0.56
Chmp5Q9D7S9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp5Q9D7S9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp5Q9D7S9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp5Q9D7S9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp5Q9D7S9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Chmp5Q9D7S9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp5Q9D7S9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp5Q9D7S9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp5Q9D7S9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp5Q9D7S9 Gm33142-201ENSMUST00000193913 867 ntBASIC18.53■□□□□ 0.56
Chmp5Q9D7S9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC18.53■□□□□ 0.56
Chmp5Q9D7S9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.53■□□□□ 0.56
Chmp5Q9D7S9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms