Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.33■□□□□ 0.36
Ccdc7Q9D541 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc7Q9D541 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc7Q9D541 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc7Q9D541 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc7Q9D541 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc7Q9D541 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc7Q9D541 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc7Q9D541 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Mir5126-201ENSMUST00000175513 77 ntBASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Gm2451-201ENSMUST00000199447 999 ntBASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Gm10290-201ENSMUST00000200451 999 ntBASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Gm5864-201ENSMUST00000202263 970 ntBASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Olfr286-202ENSMUST00000205305 969 ntBASIC17.31■□□□□ 0.36
Ccdc7Q9D541 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc7Q9D541 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc7Q9D541 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.29■□□□□ 0.36
Ccdc7Q9D541 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms