Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snrnp48Q9D361 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp48Q9D361 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp48Q9D361 Efs-202ENSMUST00000227037 2540 ntBASIC14.77□□□□□ -0.04
Snrnp48Q9D361 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Snrnp48Q9D361 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Snrnp48Q9D361 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Snrnp48Q9D361 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Snrnp48Q9D361 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.77□□□□□ -0.04
Snrnp48Q9D361 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.77□□□□□ -0.04
Snrnp48Q9D361 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Snrnp48Q9D361 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Snrnp48Q9D361 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.77□□□□□ -0.04
Snrnp48Q9D361 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Gm15467-201ENSMUST00000120582 445 ntBASIC14.77□□□□□ -0.05
Snrnp48Q9D361 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Gm12260-201ENSMUST00000122447 411 ntBASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Mir3113-201ENSMUST00000175478 76 ntBASIC14.77□□□□□ -0.05
Snrnp48Q9D361 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Gm17968-201ENSMUST00000194902 784 ntBASIC14.77□□□□□ -0.05
Snrnp48Q9D361 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Gm43514-201ENSMUST00000198852 424 ntBASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Gm45747-201ENSMUST00000212203 999 ntBASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Snrnp48Q9D361 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms