Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Gm23547-201ENSMUST00000158210 271 ntBASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.18□□□□□ -0.14
Shmt2Q9CZN7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shmt2Q9CZN7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Gm9682-201ENSMUST00000197505 556 ntBASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shmt2Q9CZN7 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shmt2Q9CZN7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms