Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Mir3081-201ENSMUST00000175305 84 ntBASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim13Q9CYB0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Gm8344-201ENSMUST00000119813 856 ntBASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Gm29518-201ENSMUST00000190858 372 ntBASIC13.72□□□□□ -0.21
Trim13Q9CYB0 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim13Q9CYB0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.71□□□□□ -0.21
Trim13Q9CYB0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim13Q9CYB0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim13Q9CYB0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
Trim13Q9CYB0 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.71□□□□□ -0.22
Trim13Q9CYB0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim13Q9CYB0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim13Q9CYB0 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim13Q9CYB0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms