Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Khdc3Q9CWU5 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Khdc3Q9CWU5 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Khdc3Q9CWU5 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Khdc3Q9CWU5 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.21□□□□□ -0.14
Khdc3Q9CWU5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Khdc3Q9CWU5 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Khdc3Q9CWU5 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Khdc3Q9CWU5 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Khdc3Q9CWU5 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Khdc3Q9CWU5 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Khdc3Q9CWU5 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Khdc3Q9CWU5 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Khdc3Q9CWU5 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.2□□□□□ -0.14
Khdc3Q9CWU5 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms