Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rpl39lQ9CQD0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Gm3375-201ENSMUST00000203929 796 ntBASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 AC122351.1-201ENSMUST00000220467 126 ntBASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Odf3b-204ENSMUST00000227834 930 ntBASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC9.66□□□□□ -0.86
Rpl39lQ9CQD0 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Gm43056-201ENSMUST00000197865 2791 ntBASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Gm44981-201ENSMUST00000205549 1943 ntBASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Gm37179-201ENSMUST00000194862 823 ntBASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 AC114585.2-202ENSMUST00000228094 426 ntBASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Gm26513-201ENSMUST00000181802 2489 ntBASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC9.65□□□□□ -0.86
Rpl39lQ9CQD0 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rpl39lQ9CQD0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rpl39lQ9CQD0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Rpl39lQ9CQD0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC9.65□□□□□ -0.87
Rpl39lQ9CQD0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rpl39lQ9CQD0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rpl39lQ9CQD0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rpl39lQ9CQD0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39lQ9CQD0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Rpl39lQ9CQD0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Rpl39lQ9CQD0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rpl39lQ9CQD0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Rpl39lQ9CQD0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Rpl39lQ9CQD0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Rpl39lQ9CQD0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC9.64□□□□□ -0.87
Rpl39lQ9CQD0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms