Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt88Q9CPR6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Krt88Q9CPR6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Gm6345-202ENSMUST00000180900 204 ntBASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.39□□□□□ -0.27
Krt88Q9CPR6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.39□□□□□ -0.27
Krt88Q9CPR6 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Gm23634-201ENSMUST00000175071 91 ntBASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Mir3081-201ENSMUST00000175305 84 ntBASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Krt88Q9CPR6 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt88Q9CPR6 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt88Q9CPR6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt88Q9CPR6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.37□□□□□ -0.27
Krt88Q9CPR6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt88Q9CPR6 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt88Q9CPR6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Krt88Q9CPR6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt88Q9CPR6 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt88Q9CPR6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.37□□□□□ -0.27
Krt88Q9CPR6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Krt88Q9CPR6 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt88Q9CPR6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Krt88Q9CPR6 Gm12497-201ENSMUST00000138778 237 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms