Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.72□□□□□ -0.05
Trim33Q99PP7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim33Q99PP7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim33Q99PP7 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim33Q99PP7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.71□□□□□ -0.05
Trim33Q99PP7 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.71□□□□□ -0.05
Trim33Q99PP7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trim33Q99PP7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim33Q99PP7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.71□□□□□ -0.05
Trim33Q99PP7 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trim33Q99PP7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim33Q99PP7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim33Q99PP7 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim33Q99PP7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim33Q99PP7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Trim33Q99PP7 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim33Q99PP7 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim33Q99PP7 Gm27525-201ENSMUST00000184465 107 ntBASIC14.71□□□□□ -0.05
Trim33Q99PP7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.71□□□□□ -0.05
Trim33Q99PP7 Gm43514-201ENSMUST00000198852 424 ntBASIC14.71□□□□□ -0.05
Trim33Q99PP7 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trim33Q99PP7 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.71□□□□□ -0.05
Trim33Q99PP7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim33Q99PP7 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim33Q99PP7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim33Q99PP7 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trim33Q99PP7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim33Q99PP7 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
Trim33Q99PP7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Trim33Q99PP7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim33Q99PP7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Celf4-206ENSMUST00000224553 1729 ntBASIC14.7□□□□□ -0.06
Trim33Q99PP7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Gm12260-201ENSMUST00000122447 411 ntBASIC14.7□□□□□ -0.06
Trim33Q99PP7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trim33Q99PP7 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.7□□□□□ -0.06
Trim33Q99PP7 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim33Q99PP7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim33Q99PP7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim33Q99PP7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim33Q99PP7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.69□□□□□ -0.06
Trim33Q99PP7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms