Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Gm23547-201ENSMUST00000158210 271 ntBASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Gm27646-201ENSMUST00000183989 110 ntBASIC14.55□□□□□ -0.08
Trim8Q99PJ2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim8Q99PJ2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Gm12895-201ENSMUST00000122214 226 ntBASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim8Q99PJ2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim8Q99PJ2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim8Q99PJ2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trim8Q99PJ2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim8Q99PJ2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim8Q99PJ2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim8Q99PJ2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim8Q99PJ2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim8Q99PJ2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trim8Q99PJ2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim8Q99PJ2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trim8Q99PJ2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim8Q99PJ2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim8Q99PJ2 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim8Q99PJ2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Trim8Q99PJ2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms