Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh15Q99PJ1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh15Q99PJ1 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdh15Q99PJ1 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.46■□□□□ 0.23
Pcdh15Q99PJ1 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh15Q99PJ1 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh15Q99PJ1 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh15Q99PJ1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh15Q99PJ1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh15Q99PJ1 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Gm13350-201ENSMUST00000120519 479 ntBASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Gm12882-201ENSMUST00000121696 517 ntBASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Gm5370-201ENSMUST00000187187 574 ntBASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Gm40466-201ENSMUST00000212174 422 ntBASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Gm45930-201ENSMUST00000221330 292 ntBASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh15Q99PJ1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 Gm15957-201ENSMUST00000118893 974 ntBASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 Gm22331-201ENSMUST00000158066 136 ntBASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh15Q99PJ1 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 Gm18027-201ENSMUST00000218947 619 ntBASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdh15Q99PJ1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms