Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Msh4Q99MT2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.45□□□□□ -0.1
Msh4Q99MT2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.45□□□□□ -0.1
Msh4Q99MT2 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.45□□□□□ -0.1
Msh4Q99MT2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.45□□□□□ -0.1
Msh4Q99MT2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Msh4Q99MT2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Msh4Q99MT2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh4Q99MT2 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.44□□□□□ -0.1
Msh4Q99MT2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh4Q99MT2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh4Q99MT2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Msh4Q99MT2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Msh4Q99MT2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.44□□□□□ -0.1
Msh4Q99MT2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Msh4Q99MT2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh4Q99MT2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.44□□□□□ -0.1
Msh4Q99MT2 Gm37935-201ENSMUST00000192012 982 ntBASIC14.44□□□□□ -0.1
Msh4Q99MT2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh4Q99MT2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh4Q99MT2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh4Q99MT2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Msh4Q99MT2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh4Q99MT2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh4Q99MT2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Msh4Q99MT2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh4Q99MT2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh4Q99MT2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh4Q99MT2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh4Q99MT2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Msh4Q99MT2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.43□□□□□ -0.1
Msh4Q99MT2 Gm2213-201ENSMUST00000197485 688 ntBASIC14.43□□□□□ -0.1
Msh4Q99MT2 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.43□□□□□ -0.1
Msh4Q99MT2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.43□□□□□ -0.1
Msh4Q99MT2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.43□□□□□ -0.1
Msh4Q99MT2 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.43□□□□□ -0.1
Msh4Q99MT2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.43□□□□□ -0.1
Msh4Q99MT2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.43□□□□□ -0.1
Msh4Q99MT2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.43□□□□□ -0.1
Msh4Q99MT2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh4Q99MT2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.43□□□□□ -0.1
Msh4Q99MT2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh4Q99MT2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms