Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.01□□□□□ -0.33
Scrt1Q99M85 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.01□□□□□ -0.33
Scrt1Q99M85 Gm10154-201ENSMUST00000084445 354 ntBASIC13.01□□□□□ -0.33
Scrt1Q99M85 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Scrt1Q99M85 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scrt1Q99M85 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scrt1Q99M85 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Scrt1Q99M85 Gm37728-201ENSMUST00000195025 2292 ntBASIC13□□□□□ -0.33
Scrt1Q99M85 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scrt1Q99M85 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scrt1Q99M85 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Scrt1Q99M85 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scrt1Q99M85 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scrt1Q99M85 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scrt1Q99M85 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scrt1Q99M85 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scrt1Q99M85 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scrt1Q99M85 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Scrt1Q99M85 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Scrt1Q99M85 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Scrt1Q99M85 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scrt1Q99M85 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13□□□□□ -0.33
Scrt1Q99M85 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scrt1Q99M85 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13□□□□□ -0.33
Scrt1Q99M85 AC166341.4-201ENSMUST00000220625 123 ntBASIC13□□□□□ -0.33
Scrt1Q99M85 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13□□□□□ -0.33
Scrt1Q99M85 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13□□□□□ -0.33
Scrt1Q99M85 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scrt1Q99M85 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13□□□□□ -0.33
Scrt1Q99M85 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13□□□□□ -0.33
Scrt1Q99M85 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13□□□□□ -0.33
Scrt1Q99M85 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scrt1Q99M85 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scrt1Q99M85 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Scrt1Q99M85 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scrt1Q99M85 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.99□□□□□ -0.33
Scrt1Q99M85 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Gm25287-201ENSMUST00000103846 110 ntBASIC12.99□□□□□ -0.33
Scrt1Q99M85 Gm22918-201ENSMUST00000103855 110 ntBASIC12.99□□□□□ -0.33
Scrt1Q99M85 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.99□□□□□ -0.33
Scrt1Q99M85 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Gm27306-201ENSMUST00000183970 107 ntBASIC12.99□□□□□ -0.33
Scrt1Q99M85 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Scrt1Q99M85 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.99□□□□□ -0.33
Scrt1Q99M85 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scrt1Q99M85 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.98□□□□□ -0.33
Scrt1Q99M85 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms