Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Cstf1Q99LC2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Cstf1Q99LC2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf1Q99LC2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf1Q99LC2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf1Q99LC2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf1Q99LC2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cstf1Q99LC2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cstf1Q99LC2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Cstf1Q99LC2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf1Q99LC2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.8□□□□□ -0.04
Cstf1Q99LC2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.8□□□□□ -0.04
Cstf1Q99LC2 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.8□□□□□ -0.04
Cstf1Q99LC2 Gm6180-201ENSMUST00000065243 498 ntBASIC14.8□□□□□ -0.04
Cstf1Q99LC2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf1Q99LC2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf1Q99LC2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cstf1Q99LC2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf1Q99LC2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf1Q99LC2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf1Q99LC2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf1Q99LC2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf1Q99LC2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cstf1Q99LC2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Gm29667-201ENSMUST00000190817 490 ntBASIC14.79□□□□□ -0.04
Cstf1Q99LC2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cstf1Q99LC2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Gm12138-201ENSMUST00000122180 951 ntBASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Gm12091-201ENSMUST00000146791 830 ntBASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cstf1Q99LC2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cstf1Q99LC2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cstf1Q99LC2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cstf1Q99LC2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cstf1Q99LC2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cstf1Q99LC2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cstf1Q99LC2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cstf1Q99LC2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cstf1Q99LC2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cstf1Q99LC2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cstf1Q99LC2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cstf1Q99LC2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cstf1Q99LC2 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.77□□□□□ -0.04
Cstf1Q99LC2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms