Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vmp1Q99KU0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Gm18489-201ENSMUST00000172565 551 ntBASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vmp1Q99KU0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Gm7787-201ENSMUST00000216858 688 ntBASIC14.29□□□□□ -0.12
Vmp1Q99KU0 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Psmb5-202ENSMUST00000227257 622 ntBASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vmp1Q99KU0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Gm14722-201ENSMUST00000118943 689 ntBASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Gm5364-201ENSMUST00000216789 889 ntBASIC14.28□□□□□ -0.12
Vmp1Q99KU0 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vmp1Q99KU0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms