Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Gm15372-201ENSMUST00000120729 834 ntBASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Thumpd1Q99J36 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Gm10231-201ENSMUST00000181584 441 ntBASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Gm27867-201ENSMUST00000184778 125 ntBASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Gm10175-202ENSMUST00000208752 441 ntBASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Thumpd1Q99J36 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Thumpd1Q99J36 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Thumpd1Q99J36 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Thumpd1Q99J36 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.21□□□□□ -0.3
Thumpd1Q99J36 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Thumpd1Q99J36 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Thumpd1Q99J36 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Gm8097-201ENSMUST00000117903 829 ntBASIC13.2□□□□□ -0.3
Thumpd1Q99J36 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Mir6982-201ENSMUST00000184354 68 ntBASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Thumpd1Q99J36 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms