Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.12■□□□□ 0.33
Smc1bQ920F6 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.12■□□□□ 0.33
Smc1bQ920F6 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.12■□□□□ 0.33
Smc1bQ920F6 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc1bQ920F6 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Gm9385-201ENSMUST00000117563 472 ntBASIC17.11■□□□□ 0.33
Smc1bQ920F6 Gm12008-201ENSMUST00000117791 755 ntBASIC17.11■□□□□ 0.33
Smc1bQ920F6 Gm6257-201ENSMUST00000163864 910 ntBASIC17.11■□□□□ 0.33
Smc1bQ920F6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Smc1bQ920F6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc1bQ920F6 BC037039-201ENSMUST00000192003 2205 ntBASIC17.11■□□□□ 0.33
Smc1bQ920F6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.1■□□□□ 0.33
Smc1bQ920F6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc1bQ920F6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Smc1bQ920F6 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.09■□□□□ 0.33
Smc1bQ920F6 Gm12151-201ENSMUST00000121374 290 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms