Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga11Q91XY8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Rubie-203ENSMUST00000227803 2430 ntBASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga11Q91XY8 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.33□□□□□ -0.11
Pcdhga11Q91XY8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga11Q91XY8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga11Q91XY8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga11Q91XY8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga11Q91XY8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga11Q91XY8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga11Q91XY8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga11Q91XY8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga11Q91XY8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga11Q91XY8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga11Q91XY8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga11Q91XY8 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.32□□□□□ -0.12
Pcdhga11Q91XY8 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.32□□□□□ -0.12
Pcdhga11Q91XY8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga11Q91XY8 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga11Q91XY8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga11Q91XY8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga11Q91XY8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga11Q91XY8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga11Q91XY8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga11Q91XY8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pcdhga11Q91XY8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga11Q91XY8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhga11Q91XY8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.32□□□□□ -0.12
Pcdhga11Q91XY8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhga11Q91XY8 Gm6550-201ENSMUST00000187574 993 ntBASIC14.32□□□□□ -0.12
Pcdhga11Q91XY8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.32□□□□□ -0.12
Pcdhga11Q91XY8 AW822252-206ENSMUST00000208904 237 ntBASIC14.32□□□□□ -0.12
Pcdhga11Q91XY8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms