Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TraipQ8VIG6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.74■□□□□ 0.11
TraipQ8VIG6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm29310-201ENSMUST00000185468 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm21825-201ENSMUST00000185728 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm29109-201ENSMUST00000185895 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm17837-201ENSMUST00000186435 985 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm21896-201ENSMUST00000186520 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm21873-201ENSMUST00000186728 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm21794-201ENSMUST00000187056 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm21880-201ENSMUST00000187275 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm21826-201ENSMUST00000187451 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm21198-201ENSMUST00000188393 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm21749-201ENSMUST00000189343 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm21901-201ENSMUST00000189568 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm29424-201ENSMUST00000189716 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm28599-201ENSMUST00000189838 694 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm21867-201ENSMUST00000189917 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm29269-201ENSMUST00000190087 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm21722-201ENSMUST00000190153 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm28423-201ENSMUST00000190701 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm21899-201ENSMUST00000190745 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm21910-201ENSMUST00000191163 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm21849-201ENSMUST00000191571 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm28678-201ENSMUST00000191593 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm20910-201ENSMUST00000193268 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm21871-201ENSMUST00000194621 696 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.73■□□□□ 0.11
TraipQ8VIG6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
TraipQ8VIG6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TraipQ8VIG6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TraipQ8VIG6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.72■□□□□ 0.11
TraipQ8VIG6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TraipQ8VIG6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TraipQ8VIG6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TraipQ8VIG6 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.72■□□□□ 0.11
TraipQ8VIG6 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.72■□□□□ 0.11
TraipQ8VIG6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.72■□□□□ 0.11
TraipQ8VIG6 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TraipQ8VIG6 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TraipQ8VIG6 Gm9726-201ENSMUST00000180321 678 ntBASIC15.72■□□□□ 0.11
TraipQ8VIG6 Gm27321-201ENSMUST00000185021 205 ntBASIC15.72■□□□□ 0.11
TraipQ8VIG6 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TraipQ8VIG6 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TraipQ8VIG6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TraipQ8VIG6 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TraipQ8VIG6 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TraipQ8VIG6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TraipQ8VIG6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.72■□□□□ 0.11
TraipQ8VIG6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TraipQ8VIG6 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TraipQ8VIG6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.71■□□□□ 0.11
TraipQ8VIG6 BC043934-202ENSMUST00000185694 2356 ntBASIC15.71■□□□□ 0.11
TraipQ8VIG6 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TraipQ8VIG6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms