Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rab40cQ8VHQ4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab40cQ8VHQ4 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rab40cQ8VHQ4 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab40cQ8VHQ4 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab40cQ8VHQ4 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab40cQ8VHQ4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab40cQ8VHQ4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab40cQ8VHQ4 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rab40cQ8VHQ4 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Rab40cQ8VHQ4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab40cQ8VHQ4 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rab40cQ8VHQ4 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rab40cQ8VHQ4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab40cQ8VHQ4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 AA414768-201ENSMUST00000121924 1257 ntBASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rab40cQ8VHQ4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab40cQ8VHQ4 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms