Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ndc1Q8VCB1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Gm43474-201ENSMUST00000196415 774 ntBASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.99□□□□□ -0.17
Ndc1Q8VCB1 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Gm13616-201ENSMUST00000120600 222 ntBASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Gm43125-201ENSMUST00000201724 730 ntBASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ndc1Q8VCB1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Auts2-212ENSMUST00000178555 309 ntBASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Gm18057-201ENSMUST00000208220 503 ntBASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ndc1Q8VCB1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms