Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.71■□□□□ 0.43
Top1mtQ8R4U6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Top1mtQ8R4U6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Top1mtQ8R4U6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Top1mtQ8R4U6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Top1mtQ8R4U6 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Top1mtQ8R4U6 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Top1mtQ8R4U6 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Top1mtQ8R4U6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Top1mtQ8R4U6 Gm45747-201ENSMUST00000212203 999 ntBASIC17.71■□□□□ 0.43
Top1mtQ8R4U6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Top1mtQ8R4U6 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Top1mtQ8R4U6 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Top1mtQ8R4U6 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Top1mtQ8R4U6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Top1mtQ8R4U6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Top1mtQ8R4U6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Top1mtQ8R4U6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Top1mtQ8R4U6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Top1mtQ8R4U6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Top1mtQ8R4U6 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Top1mtQ8R4U6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Top1mtQ8R4U6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Top1mtQ8R4U6 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Top1mtQ8R4U6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 Gm16026-204ENSMUST00000162652 683 ntBASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 Gm27301-201ENSMUST00000184012 127 ntBASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 Gm18206-201ENSMUST00000207027 926 ntBASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Top1mtQ8R4U6 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Gm9385-201ENSMUST00000117563 472 ntBASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Top1mtQ8R4U6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Gm44771-201ENSMUST00000206975 626 ntBASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Top1mtQ8R4U6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms