Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx54Q8K4L0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Gm15460-201ENSMUST00000118147 391 ntBASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Gm13464-201ENSMUST00000119418 935 ntBASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Gm4959-201ENSMUST00000197271 1044 ntBASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Gm5912-201ENSMUST00000122282 1438 ntBASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx54Q8K4L0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Gm27572-201ENSMUST00000183702 255 ntBASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Gm8242-201ENSMUST00000193029 1420 ntBASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx54Q8K4L0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Gm5763-201ENSMUST00000155951 1530 ntBASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Gm4691-201ENSMUST00000182339 1000 ntBASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Gm2451-201ENSMUST00000199447 999 ntBASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Gm5279-201ENSMUST00000199575 745 ntBASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Gm10290-201ENSMUST00000200451 999 ntBASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Gm14452-201ENSMUST00000118680 1632 ntBASIC19.22■□□□□ 0.67
Ddx54Q8K4L0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 Gm18222-201ENSMUST00000202416 1387 ntBASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx54Q8K4L0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms