Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Syne4Q8CII8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syne4Q8CII8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syne4Q8CII8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Syne4Q8CII8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syne4Q8CII8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syne4Q8CII8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syne4Q8CII8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syne4Q8CII8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syne4Q8CII8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne4Q8CII8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Syne4Q8CII8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne4Q8CII8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.68■□□□□ 0.26
Syne4Q8CII8 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne4Q8CII8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Syne4Q8CII8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Syne4Q8CII8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne4Q8CII8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne4Q8CII8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Syne4Q8CII8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.68■□□□□ 0.26
Syne4Q8CII8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne4Q8CII8 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne4Q8CII8 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Syne4Q8CII8 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.68■□□□□ 0.26
Syne4Q8CII8 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.68■□□□□ 0.26
Syne4Q8CII8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.68■□□□□ 0.26
Syne4Q8CII8 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Syne4Q8CII8 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Syne4Q8CII8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne4Q8CII8 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne4Q8CII8 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.68■□□□□ 0.26
Syne4Q8CII8 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.68■□□□□ 0.26
Syne4Q8CII8 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne4Q8CII8 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Syne4Q8CII8 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Syne4Q8CII8 Mir125a-201ENSMUST00000083545 68 ntBASIC16.68■□□□□ 0.26
Syne4Q8CII8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Syne4Q8CII8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.67■□□□□ 0.26
Syne4Q8CII8 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Syne4Q8CII8 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.67■□□□□ 0.26
Syne4Q8CII8 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.67■□□□□ 0.26
Syne4Q8CII8 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.67■□□□□ 0.26
Syne4Q8CII8 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Syne4Q8CII8 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syne4Q8CII8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Syne4Q8CII8 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Syne4Q8CII8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syne4Q8CII8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syne4Q8CII8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Syne4Q8CII8 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Syne4Q8CII8 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.66■□□□□ 0.26
Syne4Q8CII8 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.66■□□□□ 0.26
Syne4Q8CII8 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Syne4Q8CII8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syne4Q8CII8 Gm9182-201ENSMUST00000217829 639 ntBASIC16.66■□□□□ 0.26
Syne4Q8CII8 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syne4Q8CII8 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.66■□□□□ 0.26
Syne4Q8CII8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syne4Q8CII8 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syne4Q8CII8 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.66■□□□□ 0.26
Syne4Q8CII8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syne4Q8CII8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Syne4Q8CII8 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.66■□□□□ 0.26
Syne4Q8CII8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syne4Q8CII8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.65■□□□□ 0.26
Syne4Q8CII8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne4Q8CII8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne4Q8CII8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne4Q8CII8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Syne4Q8CII8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne4Q8CII8 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne4Q8CII8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms