Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rdh1Q8CGV4 Gm18049-201ENSMUST00000208909 581 ntBASIC14.39□□□□□ -0.11
Rdh1Q8CGV4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rdh1Q8CGV4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rdh1Q8CGV4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rdh1Q8CGV4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rdh1Q8CGV4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rdh1Q8CGV4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.39□□□□□ -0.11
Rdh1Q8CGV4 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.39□□□□□ -0.11
Rdh1Q8CGV4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rdh1Q8CGV4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rdh1Q8CGV4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rdh1Q8CGV4 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rdh1Q8CGV4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rdh1Q8CGV4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rdh1Q8CGV4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
Rdh1Q8CGV4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Gm15693-201ENSMUST00000120470 637 ntBASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Gm2451-201ENSMUST00000199447 999 ntBASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Gm10290-201ENSMUST00000200451 999 ntBASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rdh1Q8CGV4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Gm8410-201ENSMUST00000117225 605 ntBASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Gm29541-201ENSMUST00000191351 678 ntBASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rdh1Q8CGV4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rdh1Q8CGV4 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms