Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pabpn1Q8CCS6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC22.53■■□□□ 1.2
Pabpn1Q8CCS6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC22.53■■□□□ 1.2
Pabpn1Q8CCS6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pabpn1Q8CCS6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Gm6015-201ENSMUST00000217493 1586 ntBASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Gm6203-201ENSMUST00000209575 1342 ntBASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pabpn1Q8CCS6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pabpn1Q8CCS6 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pabpn1Q8CCS6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pabpn1Q8CCS6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pabpn1Q8CCS6 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pabpn1Q8CCS6 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pabpn1Q8CCS6 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC22.51■■□□□ 1.19
Pabpn1Q8CCS6 Gm8213-201ENSMUST00000118191 441 ntBASIC22.51■■□□□ 1.19
Pabpn1Q8CCS6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC22.51■■□□□ 1.19
Pabpn1Q8CCS6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pabpn1Q8CCS6 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pabpn1Q8CCS6 AC154595.3-201ENSMUST00000224579 384 ntBASIC22.51■■□□□ 1.19
Pabpn1Q8CCS6 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Pabpn1Q8CCS6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pabpn1Q8CCS6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pabpn1Q8CCS6 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Pabpn1Q8CCS6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pabpn1Q8CCS6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pabpn1Q8CCS6 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Pabpn1Q8CCS6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Pabpn1Q8CCS6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pabpn1Q8CCS6 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pabpn1Q8CCS6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pabpn1Q8CCS6 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Pabpn1Q8CCS6 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC22.5■■□□□ 1.19
Pabpn1Q8CCS6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC22.5■■□□□ 1.19
Pabpn1Q8CCS6 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC22.5■■□□□ 1.19
Pabpn1Q8CCS6 AC139350.3-201ENSMUST00000226151 420 ntBASIC22.5■■□□□ 1.19
Pabpn1Q8CCS6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pabpn1Q8CCS6 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC22.5■■□□□ 1.19
Pabpn1Q8CCS6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pabpn1Q8CCS6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Pabpn1Q8CCS6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pabpn1Q8CCS6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pabpn1Q8CCS6 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pabpn1Q8CCS6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pabpn1Q8CCS6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC22.49■■□□□ 1.19
Pabpn1Q8CCS6 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pabpn1Q8CCS6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pabpn1Q8CCS6 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pabpn1Q8CCS6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pabpn1Q8CCS6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pabpn1Q8CCS6 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
Pabpn1Q8CCS6 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pabpn1Q8CCS6 Gm8805-201ENSMUST00000117848 313 ntBASIC22.49■■□□□ 1.19
Pabpn1Q8CCS6 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pabpn1Q8CCS6 AC154462.2-201ENSMUST00000227519 370 ntBASIC22.49■■□□□ 1.19
Pabpn1Q8CCS6 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pabpn1Q8CCS6 Gm28265-201ENSMUST00000188201 2319 ntBASIC22.49■■□□□ 1.19
Pabpn1Q8CCS6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pabpn1Q8CCS6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pabpn1Q8CCS6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Pabpn1Q8CCS6 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pabpn1Q8CCS6 Gm42939-201ENSMUST00000197514 2205 ntBASIC22.49■■□□□ 1.19
Pabpn1Q8CCS6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pabpn1Q8CCS6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Pabpn1Q8CCS6 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pabpn1Q8CCS6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC22.48■■□□□ 1.19
Pabpn1Q8CCS6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC22.48■■□□□ 1.19
Pabpn1Q8CCS6 Gm2606-201ENSMUST00000100754 1002 ntBASIC22.48■■□□□ 1.19
Pabpn1Q8CCS6 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC22.48■■□□□ 1.19
Pabpn1Q8CCS6 Gm12537-201ENSMUST00000119266 1002 ntBASIC22.48■■□□□ 1.19
Pabpn1Q8CCS6 Gm12070-201ENSMUST00000119551 1002 ntBASIC22.48■■□□□ 1.19
Pabpn1Q8CCS6 Gm12671-201ENSMUST00000119978 1002 ntBASIC22.48■■□□□ 1.19
Pabpn1Q8CCS6 Gm13292-201ENSMUST00000120014 1000 ntBASIC22.48■■□□□ 1.19
Pabpn1Q8CCS6 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Pabpn1Q8CCS6 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC22.48■■□□□ 1.19
Pabpn1Q8CCS6 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Pabpn1Q8CCS6 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC22.48■■□□□ 1.19
Pabpn1Q8CCS6 Gm10359-201ENSMUST00000180167 1002 ntBASIC22.48■■□□□ 1.19
Pabpn1Q8CCS6 Gm12033-201ENSMUST00000180654 1002 ntBASIC22.48■■□□□ 1.19
Pabpn1Q8CCS6 Gm5559-201ENSMUST00000180755 1002 ntBASIC22.48■■□□□ 1.19
Pabpn1Q8CCS6 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC22.48■■□□□ 1.19
Pabpn1Q8CCS6 Gm7293-201ENSMUST00000216682 1007 ntBASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms